StrokeSeg Documentation
=======================

.. warning::

   This application is for research purposes only!

.. toctree::
   :maxdepth: 2
   :caption: Contents:

   USER_GUIDE

Software description at :cite:p:`kerverdo2025`.

Model description at :cite:p:`dimatteo2026`.

API Documentation
=================

- `Python API Documentation <https://empenn-stroke.github.io/StrokeSegLab_doc/>`_
- `C++ Bootstrapper Documentation <https://empenn-stroke.github.io/StrokeSegBootstrapper_doc/>`_

Repositories
------------

Click on each circle intersection to reach the corresponding repository.
Or simply access :  
   - `StrokeSeg Lab (Scientific code) <https://github.com/Empenn-Stroke/StrokeSegLab>`_
   - `StrokeSeg App (Compiled binaries, installer) <https://github.com/Empenn-Stroke/StrokeSegApp>`_

Model Checkpoints are available here :
   - T1-w only: `Zenodo <https://zenodo.org/records/18360630>`_
   - T1-w and FLAIR fine-tuned: Soon

.. raw:: html

   <div style="margin-bottom: 0;">
     <iframe src="_static/venn.html"
             width="600"
             height="400"
             style="border:none; display:block;">
     </iframe>
   </div>

References
----------

.. bibliography::